EncounterLite (Unnamed - org.ecocean:wildbook:war:5.1.0-RELEASE 5.1.0-RELEASE API)

java.lang.Object
- org.ecocean.grid.EncounterLite

All Implemented Interfaces:: Serializable

public class EncounterLite
extends Object
implements Serializable

See Also:: Serialized Form

Field Summary

Fields
Modifier and Type	Field and Description
`private String`	`belongsToMarkedIndividual`
`(package private) String`	`date`
`private String`	`encounterNumber`
`private double[]`	`leftReferenceSpotsX`
`private double[]`	`leftReferenceSpotsY`
`private double[]`	`rightReferenceSpotsX`
`private double[]`	`rightReferenceSpotsY`
`private double[]`	`rightSpotsX`
`private double[]`	`rightSpotsY`
`(package private) static long`	`serialVersionUID`
`private String`	`sex`
`private double`	`size`
`private double[]`	`spotsX`
`private double[]`	`spotsY`

Constructor Summary

Constructors
Constructor and Description

EncounterLite()

EncounterLite(Encounter enc)

Constructors
Constructor and Description
`EncounterLite()`
`EncounterLite(Encounter enc)`

Method Summary

Methods
Modifier and Type	Method and Description
`private void`	`doAffine(FingerPrint fp)`
`String`	`getDate()`
`String`	`getEncounterNumber()`
`double`	`getHighestRightSpot()`
`double`	`getHighestSpot()`
`double`	`getLeftmostRightSpot()`
`double`	`getLeftmostSpot()`
`SuperSpot[]`	`getLeftReferenceSpots()`
`double`	`getLowestRightSpot()`
`double`	`getLowestSpot()`
`MatchObject`	`getPointsForBestMatch(SuperSpot[] newspotsTemp, double epsilon, double R, double Sizelim, double maxTriangleRotation, double C, boolean secondRun, boolean rightScan)`
`double`	`getRightmostRightSpot()`
`double`	`getRightmostSpot()`
`SuperSpot[]`	`getRightReferenceSpots()`
`ArrayList`	`getRightSpots()`
`ArrayList`	`getSpots()`
`Point2D[]`	`getThreeLeftFiducialPoints()`
`Point2D[]`	`getThreeRightFiducialPoints()`
`I3SMatchObject`	`i3sScan(EncounterLite newEnc, boolean scanRight)` This method allows us to use the I3S match algorithm as well.
`void`	`processLeftReferenceSpots(ArrayList<SuperSpot> initSpots)`
`void`	`processLeftSpots(ArrayList<SuperSpot> initSpots)`
`void`	`processRightReferenceSpots(ArrayList<SuperSpot> initSpots)`
`void`	`processRightSpots(ArrayList<SuperSpot> initSpots)`
`private VertexPointMatch[]`	`secondGrothPass(SuperSpot[] secondNewSpots, SuperSpot[] secondBaseSpots, double epsilon, double R, double Sizelim, double maxTriangleRotation, double C)`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

serialVersionUID
```
static final long serialVersionUID
```
See Also:
Constant Field Values

spotsX
```
private double[] spotsX
```

spotsY
```
private double[] spotsY
```

rightSpotsX
```
private double[] rightSpotsX
```

rightSpotsY
```
private double[] rightSpotsY
```

leftReferenceSpotsX
```
private double[] leftReferenceSpotsX
```

leftReferenceSpotsY
```
private double[] leftReferenceSpotsY
```

rightReferenceSpotsX
```
private double[] rightReferenceSpotsX
```

rightReferenceSpotsY
```
private double[] rightReferenceSpotsY
```

size
```
private double size
```

sex
```
private String sex
```

encounterNumber
```
private String encounterNumber
```

belongsToMarkedIndividual

private String belongsToMarkedIndividual

date
```
String date
```

Constructor Detail

EncounterLite
```
public EncounterLite()
```

EncounterLite
```
public EncounterLite(Encounter enc)
```

Method Detail

getDate
```
public String getDate()
```

getSpots
```
public ArrayList getSpots()
```

getRightSpots
```
public ArrayList getRightSpots()
```

getLeftReferenceSpots

public SuperSpot[] getLeftReferenceSpots()

getRightReferenceSpots

public SuperSpot[] getRightReferenceSpots()

getEncounterNumber
```
public String getEncounterNumber()
```

getPointsForBestMatch

public MatchObject getPointsForBestMatch(SuperSpot[] newspotsTemp,
                                double epsilon,
                                double R,
                                double Sizelim,
                                double maxTriangleRotation,
                                double C,
                                boolean secondRun,
                                boolean rightScan)

secondGrothPass

private VertexPointMatch[] secondGrothPass(SuperSpot[] secondNewSpots,
                                 SuperSpot[] secondBaseSpots,
                                 double epsilon,
                                 double R,
                                 double Sizelim,
                                 double maxTriangleRotation,
                                 double C)

i3sScan

public I3SMatchObject i3sScan(EncounterLite newEnc,
                     boolean scanRight)

This method allows us to use the I3S match algorithm as well.

doAffine

private void doAffine(FingerPrint fp)

getThreeLeftFiducialPoints

public Point2D[] getThreeLeftFiducialPoints()

getThreeRightFiducialPoints

public Point2D[] getThreeRightFiducialPoints()

getRightmostSpot
```
public double getRightmostSpot()
```

getLeftmostSpot
```
public double getLeftmostSpot()
```

getHighestSpot
```
public double getHighestSpot()
```

getLowestSpot
```
public double getLowestSpot()
```

getRightmostRightSpot
```
public double getRightmostRightSpot()
```

getLeftmostRightSpot
```
public double getLeftmostRightSpot()
```

getHighestRightSpot
```
public double getHighestRightSpot()
```

getLowestRightSpot
```
public double getLowestRightSpot()
```

processLeftSpots

public void processLeftSpots(ArrayList<SuperSpot> initSpots)

processLeftReferenceSpots

public void processLeftReferenceSpots(ArrayList<SuperSpot> initSpots)

processRightSpots

public void processRightSpots(ArrayList<SuperSpot> initSpots)

processRightReferenceSpots

public void processRightReferenceSpots(ArrayList<SuperSpot> initSpots)

Class EncounterLite

Field Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Field Detail

serialVersionUID

spotsX

spotsY

rightSpotsX

rightSpotsY

leftReferenceSpotsX

leftReferenceSpotsY

rightReferenceSpotsX

rightReferenceSpotsY

size

sex

encounterNumber

belongsToMarkedIndividual

date

Constructor Detail

EncounterLite

EncounterLite

Method Detail

getDate

getSpots

getRightSpots

getLeftReferenceSpots

getRightReferenceSpots

getEncounterNumber

getPointsForBestMatch

secondGrothPass

i3sScan

doAffine

getThreeLeftFiducialPoints

getThreeRightFiducialPoints

getRightmostSpot

getLeftmostSpot

getHighestSpot

getLowestSpot

getRightmostRightSpot

getLeftmostRightSpot

getHighestRightSpot

getLowestRightSpot

processLeftSpots

processLeftReferenceSpots

processRightSpots

processRightReferenceSpots